STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM62612.1ABC transporter, ATP-binding protein. (224 aa)    
Predicted Functional Partners:
CEM61225.1
Efflux ABC transporter, permease protein.
 
 0.978
CEM61226.1
Efflux ABC transporter, permease protein.
 
 0.978
CEM61413.1
ABC transporter, ATP-binding protein.
 
    
0.922
CEM61412.1
ABC transporter, ATP-binding protein.
 
    
0.915
CEM62607.1
Efflux ABC transporter, permease protein.
 
 0.899
CEM62608.1
Efflux ABC transporter, permease protein.
 
 0.888
CEM60619.1
ABC transporter, permease protein.
 
 
    0.882
CEM61736.1
ABC transporter, ATP-binding protein.
   
0.879
CEM62601.1
Efflux ABC transporter, permease protein.
 
 
 0.843
CEM62611.1
FTR1 family protein.
 
  
 0.812
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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