STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM62626.1Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family. (112 aa)    
Predicted Functional Partners:
CEM62625.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.983
CEM62627.1
Stage II sporulation protein E.
 
 
 0.982
CEM61310.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein).
  
  
 0.918
CEM61825.1
Stage II sporulation protein E (modular protein).
 
 
 0.913
CEM61824.1
Stage II sporulation protein E.
 
 
 0.908
fliN
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
   0.883
CEM61784.1
Diguanylate cyclase (GGDEF) domain protein (fragment).
  
  
 0.851
CEM60926.1
Stage II sporulation protein E.
 
 
 0.827
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
    0.796
CEM63082.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
    0.773
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.