STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM62627.1Stage II sporulation protein E. (553 aa)    
Predicted Functional Partners:
CEM61310.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein).
  
 0.982
CEM62626.1
Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.982
CEM61784.1
Diguanylate cyclase (GGDEF) domain protein (fragment).
  
 
 0.980
CEM62362.1
Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.954
CEM62625.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.952
CEM61007.1
Response regulator receiver domain protein.
  
 
 0.844
CEM61826.1
Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
 
 0.816
CEM61785.1
Diguanylate cyclase (GGDEF) domain protein (fragment).
  
  
 0.797
CEM63082.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
    0.748
CEM61588.1
Adenylate/guanylate cyclase catalytic domain protein.
 
 
 0.691
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.