Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
adhNADPH-dependent butanol dehydrogenase. (384 aa)    
Predicted Functional Partners:
CEM61086.1
Alcohol dehydrogenase, iron-dependent.
  
     0.771
ywdH
Putative aldehyde dehydrogenase YwdH; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the aldehyde dehydrogenase family.
 
 
 0.693
ydbK
Putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.692
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.644
iolA
Methylmalonate semialdehyde dehydrogenase (acylating) 2.
 
 
 0.609
gapA
Glyceraldehyde-3-phosphate dehydrogenase A; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
  
 0.608
CEM62108.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
  
 0.596
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.592
glgA-2
Glycogen/starch synthase, ADP-glucose type.
   
    0.592
CEM62640.1
Hypothetical protein; No homology to any previously reported sequences.
       0.558
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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