STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM62684.1PASTA domain protein. (331 aa)    
Predicted Functional Partners:
CEM62685.1
ABC transporter, substrate-binding protein, family 3.
  
  
 0.667
CEM61762.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.592
CEM62686.1
ABC transporter, substrate-binding protein, family 3; Belongs to the bacterial solute-binding protein 3 family.
  
  
 0.572
CEM60674.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.560
mreD
Rod shape-determining protein MreD.
  
  
 0.553
CEM62583.1
Polysaccharide deacetylase.
 
   
 0.543
rsgA
Putative ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
  
  
 0.536
CEM60811.1
POTRA domain protein, FtsQ-type; Essential cell division protein.
 
  
 0.531
CEM61727.1
Carbohydrate kinase, FGGY family protein.
  
   
 0.524
CEM62618.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.506
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.