CEM62685.1 protein (Treponema phagedenis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Treponema phagedenis

NCBI taxonomy Id: 162
Other names: T. phagedenis

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CEM61129.1	CEM61310.1	TPHV1_150011	TPHV1_170041	ABC transporter, substrate-binding protein, family 3.	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein).	0.458
CEM61129.1	CEM61478.1	TPHV1_150011	TPHV1_20015	ABC transporter, substrate-binding protein, family 3.	Pyridine nucleotide-disulfide oxidoreductase (modular protein).	0.451
CEM61129.1	CEM61784.1	TPHV1_150011	TPHV1_210017	ABC transporter, substrate-binding protein, family 3.	Diguanylate cyclase (GGDEF) domain protein (fragment).	0.507
CEM61129.1	CEM61929.1	TPHV1_150011	TPHV1_230006	ABC transporter, substrate-binding protein, family 3.	ABC transporter, permease protein.	0.984
CEM61129.1	CEM62685.1	TPHV1_150011	TPHV1_40188	ABC transporter, substrate-binding protein, family 3.	ABC transporter, substrate-binding protein, family 3.	0.745
CEM61129.1	CEM63049.1	TPHV1_150011	TPHV1_60037	ABC transporter, substrate-binding protein, family 3.	ABC transporter, permease protein.	0.983
CEM61129.1	aapP	TPHV1_150011	TPHV1_230007	ABC transporter, substrate-binding protein, family 3.	Amino-acid transporter subunit; Function of strongly homologous gene; transporter.	0.830
CEM61129.1	yecC	TPHV1_150011	TPHV1_60038	ABC transporter, substrate-binding protein, family 3.	Putative transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.828
CEM61310.1	CEM61129.1	TPHV1_170041	TPHV1_150011	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein).	ABC transporter, substrate-binding protein, family 3.	0.458
CEM61310.1	CEM61478.1	TPHV1_170041	TPHV1_20015	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein).	Pyridine nucleotide-disulfide oxidoreductase (modular protein).	0.636
CEM61310.1	CEM61784.1	TPHV1_170041	TPHV1_210017	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein).	Diguanylate cyclase (GGDEF) domain protein (fragment).	0.999
CEM61310.1	CEM62685.1	TPHV1_170041	TPHV1_40188	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein).	ABC transporter, substrate-binding protein, family 3.	0.458
CEM61310.1	CEM62686.1	TPHV1_170041	TPHV1_40189	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein).	ABC transporter, substrate-binding protein, family 3; Belongs to the bacterial solute-binding protein 3 family.	0.458
CEM61478.1	CEM61129.1	TPHV1_20015	TPHV1_150011	Pyridine nucleotide-disulfide oxidoreductase (modular protein).	ABC transporter, substrate-binding protein, family 3.	0.451
CEM61478.1	CEM61310.1	TPHV1_20015	TPHV1_170041	Pyridine nucleotide-disulfide oxidoreductase (modular protein).	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein).	0.636
CEM61478.1	CEM61784.1	TPHV1_20015	TPHV1_210017	Pyridine nucleotide-disulfide oxidoreductase (modular protein).	Diguanylate cyclase (GGDEF) domain protein (fragment).	0.760
CEM61478.1	CEM62685.1	TPHV1_20015	TPHV1_40188	Pyridine nucleotide-disulfide oxidoreductase (modular protein).	ABC transporter, substrate-binding protein, family 3.	0.451
CEM61478.1	CEM62686.1	TPHV1_20015	TPHV1_40189	Pyridine nucleotide-disulfide oxidoreductase (modular protein).	ABC transporter, substrate-binding protein, family 3; Belongs to the bacterial solute-binding protein 3 family.	0.451
CEM61784.1	CEM61129.1	TPHV1_210017	TPHV1_150011	Diguanylate cyclase (GGDEF) domain protein (fragment).	ABC transporter, substrate-binding protein, family 3.	0.507
CEM61784.1	CEM61310.1	TPHV1_210017	TPHV1_170041	Diguanylate cyclase (GGDEF) domain protein (fragment).	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein).	0.999