Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
oadBOxaloacetate decarboxylase beta chain 1. (460 aa)    
Predicted Functional Partners:
oadA
Oxaloacetate decarboxylase alpha chain.
 
 
 0.998
CEM62689.1
Oxaloacetate decarboxylase gamma chain; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the OadG family.
  
 
 0.978
gcdC
Glutaconyl-CoA decarboxylase subunit gamma.
 
  
 0.935
ydbK
Putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
 0.930
nifJ
Pyruvate-flavodoxin oxidoreductase.
    
 0.928
gcdA
Glutaconyl-CoA decarboxylase subunit alpha.
  
 
 0.911
gcdB
Glutaconyl-CoA decarboxylase subunit beta.
  
  
 
0.903
ppdK
Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
    
 0.903
ppdK-2
Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
    
 0.903
CEM61273.1
Oxaloacetate decarboxylase gamma chain; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the OadG family.
    
  0.902
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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