STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM62698.1Trypsin. (406 aa)    
Predicted Functional Partners:
CEM62038.1
7TM diverse intracellular signaling (fragment).
  
  
 0.795
FlgF
Putative flagellar basal-body rod protein FlgF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    
   0.689
CEM60452.1
Peptidyl-prolyl cis-trans isomerase.
 
 
 0.621
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
 
    0.612
CEM61310.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein).
 
  
 0.600
CEM60657.1
LysM domain protein.
  
 
 0.580
rplY
50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
 
   0.478
CEM61784.1
Diguanylate cyclase (GGDEF) domain protein (fragment).
  
  
 0.465
CEM61302.1
PspC domain protein.
  
  
 0.460
CEM63123.1
Ankyrin repeat protein.
  
 0.458
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.