STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xdhCXanthine dehydrogenase, Fe-S binding subunit; Function of homologous gene experimentally demonstrated in an other organism; carrier. (153 aa)    
Predicted Functional Partners:
CEM62701.1
FAD binding domain in molybdopterin dehydrogenase.
 
 0.998
CEM62702.1
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein.
 
 0.998
CEM63029.1
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein.
 
 
 0.934
CEM63031.1
FAD binding domain in molybdopterin dehydrogenase.
 
 
 0.918
CEM61148.1
Putative xanthine dehydrogenase accessory factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.836
yqeC
Putative selenium-dependent hydroxylase accessory protein YqeC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.793
yugH
Putative aminotransferase YugH; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
      0.772
Xdh
Selenium-dependent molybdenum hydroxylase 1.
 
 
0.744
ydbK
Putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.492
nifJ
Pyruvate-flavodoxin oxidoreductase.
     
 0.476
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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