Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
radCConserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0758 family. (228 aa)    
Predicted Functional Partners:
mreC
Cell shape-determining protein MreC; Involved in formation and maintenance of cell shape.
  
  
 0.855
CEM61784.1
Diguanylate cyclase (GGDEF) domain protein (fragment).
  
    0.715
CEM60743.1
ComEC/Rec2-like protein.
  
  
 0.671
dprA
DNA protecting protein DprA.
  
  
 0.669
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
 
   
 0.667
CEM61701.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.611
CEM62961.1
ComF-like protein.
  
    0.611
CEM61310.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein).
  
    0.610
CEM62297.1
DNA mismatch repair protein MutL (fragment).
 
   
 0.594
CEM61785.1
Diguanylate cyclase (GGDEF) domain protein (fragment).
  
    0.587
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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