Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CEM62903.1Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. (332 aa)    
Predicted Functional Partners:
CEM62901.1
Receptor family ligand-binding protein.
 
 
 0.999
livH
Leucine/isoleucine/valine transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
0.999
livG
Leucine/isoleucine/valine transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 0.999
livF
Leucine/isoleucine/valine transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 0.999
yecC
Putative transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
    
 0.911
lptB
Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
    
 0.910
rbsA
Sugar ABC transporter, ATP binding protein.
    
 0.903
yfiL
Uncharacterized ABC transporter ATP-binding protein YfiL.
      0.898
aapP
Amino-acid transporter subunit; Function of strongly homologous gene; transporter.
 
    
 0.894
CEM61800.1
ABC transporter, ATP-binding protein.
    
 0.889
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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