Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
livGLeucine/isoleucine/valine transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter. (282 aa)    
Predicted Functional Partners:
CEM62901.1
Receptor family ligand-binding protein.
 
 
 0.999
livH
Leucine/isoleucine/valine transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
CEM62903.1
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
livF
Leucine/isoleucine/valine transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 
0.998
oppD
Oligopeptide transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the ABC transporter superfamily.
     
0.899
CEM62130.1
ABC transporter, ATP-binding protein.
     
0.880
oppD-2
Oligopeptide transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the ABC transporter superfamily.
     
0.819
CEM63049.1
ABC transporter, permease protein.
 
    
 0.793
CEM62906.1
CBS domain protein.
 
     0.746
CEM62891.1
Inosine 5-monophosphate dehydrogenase.
  
  
 0.697
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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