Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CEM62909.1Glycosyl hydrolase family 3 N-terminal domain protein. (398 aa)    
Predicted Functional Partners:
CEM61628.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
 0.956
CEM63469.1
Glycosyl hydrolase family 3 N-terminal domain protein.
  
  
 
0.929
CEM61404.1
Glycosyl hydrolase family 3 N-terminal domain protein.
  
  
 
0.927
CEM62262.1
Glycosyl hydrolase, family 18.
     
 0.908
CEM60392.1
Glycosyl hydrolase family 20, catalytic domain protein.
    
 0.907
CEM60663.1
Glycosyl hydrolase family 20, catalytic domain protein.
    
 0.907
CEM61834.1
Beta-lactamase.
  
 0.904
miaA-2
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
       0.773
CEM61835.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
 0.759
CEM62910.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.727
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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