STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yufPUncharacterized ABC transporter permease protein YufP; Belongs to the binding-protein-dependent transport system permease family. (372 aa)    
Predicted Functional Partners:
yufO
Uncharacterized ABC transporter ATP-binding protein YufO.
 
 0.998
yufQ
Uncharacterized ABC transporter permease protein YufQ; Belongs to the binding-protein-dependent transport system permease family.
 
0.998
CEM62916.1
Basic membrane protein.
 
 
 0.988
CEM62506.1
ABC transporter, ATP-binding protein.
  
 0.944
CEM62508.1
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.935
CEM62509.1
Branched-chain amino acid ABC transporter, permease protein.
 
  
 0.928
tpn-2
Membrane lipoprotein TpN38(b).
 
  
 0.857
CEM62005.1
ABC transporter, ATP-binding protein.
     0.505
mglA-2
Fused methyl-galactoside transporter subunits of ABC superfamily: ATP-binding components; Function of homologous gene experimentally demonstrated in an other organism; transporter.
     0.477
ygaF
Putative peroxiredoxin YgaF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.438
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.