Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEM62921.1Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (294 aa)    
Predicted Functional Partners:
ygaF
Putative peroxiredoxin YgaF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.773
CEM60687.1
Choline/ethanolamine kinase.
  
  
 0.517
yufO
Uncharacterized ABC transporter ATP-binding protein YufO.
       0.438
yufP
Uncharacterized ABC transporter permease protein YufP; Belongs to the binding-protein-dependent transport system permease family.
       0.438
yufQ
Uncharacterized ABC transporter permease protein YufQ; Belongs to the binding-protein-dependent transport system permease family.
       0.438
secY
Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
   
   0.427
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.