Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CEM62744.1Alpha-L-fucosidase. (455 aa)    
Predicted Functional Partners:
CEM62955.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
  0.974
CEM62261.1
Alpha-L-fucosidase.
  
  
 
0.927
CEM61098.1
Glycosyl hydrolase family 35; Belongs to the glycosyl hydrolase 35 family.
 
  
 0.750
CEM60392.1
Glycosyl hydrolase family 20, catalytic domain protein.
  
 0.688
CEM62262.1
Glycosyl hydrolase, family 18.
 
   
 0.613
cutC
Copper homeostasis protein CutC; Participates in the control of copper homeostasis. Belongs to the CutC family.
 
   
 0.540
CEM61289.1
PHP domain protein.
 
   
 0.528
CEM60765.1
Endonuclease/exonuclease/phosphatase family protein.
 
     0.517
CEM62773.1
Beta-1,4-mannooligosaccharide phosphorylase.
 
     0.457
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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