STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM62765.1Fibronectin type III domain protein (modular protein). (1122 aa)    
Predicted Functional Partners:
CEM63457.1
Tetratricopeptide repeat protein.
   
 
 0.678
nifJ
Pyruvate-flavodoxin oxidoreductase.
   
   0.562
CEM62540.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
0.516
CEM63038.1
Exported hypothetical protein; No homology to any previously reported sequences.
  
  
0.512
CEM60697.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
   0.455
CEM62766.1
Hypothetical protein; No homology to any previously reported sequences.
       0.422
CEM62767.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0597 family.
       0.422
CEM62768.1
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.422
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.