STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM62813.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (176 aa)    
Predicted Functional Partners:
CEM62814.1
FemAB family protein.
 
     0.553
CEM62812.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.535
CEM62811.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
       0.459
CEM63306.1
Putative shikimate dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
      
 0.422
CEM61966.1
Rubredoxin.
  
  
 0.414
CEM61784.1
Diguanylate cyclase (GGDEF) domain protein (fragment).
   
 
 0.406
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.