STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM62816.1Acyl-CoA thioester hydrolase, YbgC/YbaW family. (133 aa)    
Predicted Functional Partners:
CEM62817.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.773
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.644
CEM62818.1
Putative pyrimidine 5'-nucleotidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.620
CEM61737.1
Oxidoreductase, short chain dehydrogenase/reductase family protein.
  
 
 0.517
CEM63252.1
Transport energizing protein, ExbD/TolR family.
 
  
 0.515
secA
Protein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.
   
   0.489
whiG
RNA polymerase sigma factor WhiG; Belongs to the sigma-70 factor family.
   
   0.482
crt
3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.474
nifJ
Pyruvate-flavodoxin oxidoreductase.
     
 0.455
adhE
Fused acetaldehyde-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
     
 0.439
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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