Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ycjVPutative sugar transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (370 aa)    
Predicted Functional Partners:
CEM62309.1
ABC transporter, permease protein.
 
 0.985
CEM62310.1
ABC transporter, permease protein.
 
 0.982
CEM63055.1
ABC transporter, permease protein.
 
 0.981
CEM63054.1
ABC transporter, permease protein.
 
 0.979
CEM61106.1
ABC transporter, permease protein.
 
 
 0.946
CEM60649.1
ABC transporter, permease protein.
 
 
 0.941
CEM62308.1
ABC transporter, solute-binding protein.
  
 0.936
CEM63056.1
ABC transporter, solute-binding protein.
  
 0.936
amyD
Putative starch degradation products transport system permease protein AmyD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.926
CEM61107.1
ABC transporter, permease protein.
 
 
 0.920
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
Server load: low (24%) [HD]