STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM62875.1Transcriptional regulator, TetR family. (234 aa)    
Predicted Functional Partners:
CEM60999.1
Hypothetical protein; No homology to any previously reported sequences.
  
   
 0.690
CEM62876.1
ABC transporter, ATP-binding protein.
 
   
 0.683
CEM62877.1
ABC transporter, ATP-binding protein.
 
   
 0.673
CEM61417.1
Putative ATP synthase F0, A subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
   
 0.652
CEM61416.1
ABC transporter, ATP-binding protein.
  
   
 0.626
CEM60990.1
Membrane hypothetical protein; No homology to any previously reported sequences.
  
   
 0.592
CEM62874.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
     
 0.566
CEM62708.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.507
CEM62888.1
ABC transporter, ATP-binding/permease protein.
  
   
 0.499
CEM62887.1
Lipid A export ATP-binding/permease protein MsbA.
  
   
 0.454
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.