Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEM62876.1ABC transporter, ATP-binding protein. (581 aa)    
Predicted Functional Partners:
CEM62877.1
ABC transporter, ATP-binding protein.
 
    
0.826
CEM60990.1
Membrane hypothetical protein; No homology to any previously reported sequences.
  
     0.775
CEM62875.1
Transcriptional regulator, TetR family.
 
     0.681
CEM61482.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.661
CEM63027.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.628
CEM63400.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.563
CEM63399.1
Cobalt transport protein.
  
     0.513
CEM63025.1
Cobalt transport protein.
  
     0.431
CEM61480.1
Cobalt transport protein.
  
     0.428
CEM62277.1
FtsK/SpoIIIE family protein; Belongs to the FtsK/SpoIIIE/SftA family.
      
 0.426
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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