STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM62957.1Protein LplC (fragment). (224 aa)    
Predicted Functional Partners:
yteP-2
Uncharacterized multiple-sugar transport system permease YteP.
 
 0.988
CEM62956.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
 0.984
yteP
Uncharacterized multiple-sugar transport system permease YteP.
 
 0.968
CEM62776.1
ABC transporter, permease protein.
 
 0.967
CEM62774.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
 0.959
CEM61287.1
ABC transporter, solute-binding protein.
 
 0.943
ytcP
Putative ABC transporter permease protein YtcP; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 
0.912
lplC
Protein LplC.
  
  
 
0.907
CEM61106.1
ABC transporter, permease protein.
 
 
 0.869
CEM60649.1
ABC transporter, permease protein.
 
 
 0.864
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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