Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEM60452.1 | CEM60657.1 | TPHV1_10120 | TPHV1_10325 | Peptidyl-prolyl cis-trans isomerase. | LysM domain protein. | 0.949 |
CEM60452.1 | CEM61478.1 | TPHV1_10120 | TPHV1_20015 | Peptidyl-prolyl cis-trans isomerase. | Pyridine nucleotide-disulfide oxidoreductase (modular protein). | 0.843 |
CEM60452.1 | CEM62975.1 | TPHV1_10120 | TPHV1_510042 | Peptidyl-prolyl cis-trans isomerase. | DnaJ domain protein. | 0.779 |
CEM60452.1 | dnaK | TPHV1_10120 | TPHV1_110012 | Peptidyl-prolyl cis-trans isomerase. | Chaperone Hsp70, co-chaperone with DnaJ; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.953 |
CEM60452.1 | groL | TPHV1_10120 | TPHV1_100069 | Peptidyl-prolyl cis-trans isomerase. | Cpn60 chaperonin GroEL, large subunit of GroESL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.571 |
CEM60452.1 | grpE | TPHV1_10120 | TPHV1_110013 | Peptidyl-prolyl cis-trans isomerase. | Protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | 0.467 |
CEM60452.1 | htpG | TPHV1_10120 | TPHV1_500015 | Peptidyl-prolyl cis-trans isomerase. | Chaperone protein HtpG; Molecular chaperone. Has ATPase activity. | 0.970 |
CEM60452.1 | nifJ | TPHV1_10120 | TPHV1_50039 | Peptidyl-prolyl cis-trans isomerase. | Pyruvate-flavodoxin oxidoreductase. | 0.733 |
CEM60657.1 | CEM60452.1 | TPHV1_10325 | TPHV1_10120 | LysM domain protein. | Peptidyl-prolyl cis-trans isomerase. | 0.949 |
CEM60657.1 | CEM61478.1 | TPHV1_10325 | TPHV1_20015 | LysM domain protein. | Pyridine nucleotide-disulfide oxidoreductase (modular protein). | 0.743 |
CEM60657.1 | CEM62975.1 | TPHV1_10325 | TPHV1_510042 | LysM domain protein. | DnaJ domain protein. | 0.905 |
CEM60657.1 | adhR | TPHV1_10325 | TPHV1_260003 | LysM domain protein. | HTH-type transcriptional regulator AdhR (fragment). | 0.660 |
CEM60657.1 | groL | TPHV1_10325 | TPHV1_100069 | LysM domain protein. | Cpn60 chaperonin GroEL, large subunit of GroESL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.939 |
CEM60657.1 | grpE | TPHV1_10325 | TPHV1_110013 | LysM domain protein. | Protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | 0.958 |
CEM60657.1 | hslU | TPHV1_10325 | TPHV1_110046 | LysM domain protein. | Molecular chaperone and ATPase component of HslUV protease; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.682 |
CEM60657.1 | htpG | TPHV1_10325 | TPHV1_500015 | LysM domain protein. | Chaperone protein HtpG; Molecular chaperone. Has ATPase activity. | 0.987 |
CEM60657.1 | nifJ | TPHV1_10325 | TPHV1_50039 | LysM domain protein. | Pyruvate-flavodoxin oxidoreductase. | 0.783 |
CEM61478.1 | CEM60452.1 | TPHV1_20015 | TPHV1_10120 | Pyridine nucleotide-disulfide oxidoreductase (modular protein). | Peptidyl-prolyl cis-trans isomerase. | 0.843 |
CEM61478.1 | CEM60657.1 | TPHV1_20015 | TPHV1_10325 | Pyridine nucleotide-disulfide oxidoreductase (modular protein). | LysM domain protein. | 0.743 |
CEM61478.1 | CEM62975.1 | TPHV1_20015 | TPHV1_510042 | Pyridine nucleotide-disulfide oxidoreductase (modular protein). | DnaJ domain protein. | 0.768 |
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