STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM63026.1Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. (184 aa)    
Predicted Functional Partners:
CEM63024.1
Putative ABC transporter ATP-binding protein TDE_0282; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.812
CEM63027.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.776
CEM63025.1
Cobalt transport protein.
       0.773
CEM62324.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
      0.660
rpsM
30S ribosomal subunit protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.
   
    0.567
CEM61216.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.566
CEM63255.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.540
CEM63023.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
       0.485
CEM63420.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.426
CEM63021.1
Hypothetical protein; No homology to any previously reported sequences.
       0.420
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.