Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
spsCSpore coat polysaccharide biosynthesis protein SpsC; Belongs to the DegT/DnrJ/EryC1 family. (387 aa)    
Predicted Functional Partners:
CEM61109.1
Polysaccharide biosynthesis protein.
  
 0.982
CEM62976.1
SAF domain protein.
 
  
 0.828
CEM61942.1
Cytidylyltransferase.
 
  
 0.824
CEM60609.1
DegT/DnrJ/EryC1/StrS aminotransferase family protein; Belongs to the DegT/DnrJ/EryC1 family.
  
     0.770
CEM63031.1
FAD binding domain in molybdopterin dehydrogenase.
  
  
 0.650
CEM63029.1
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein.
       0.647
ndhS
Nicotinate dehydrogenase small FeS subunit.
       0.645
wbpA
UDP-N-acetyl-D-glucosamine 6-dehydrogenase.
  
  
 0.585
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
  
 0.570
rmlB
dTDP-glucose 4,6 dehydratase, NAD(P)-binding; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.562
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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