STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spsCSpore coat polysaccharide biosynthesis protein SpsC; Belongs to the DegT/DnrJ/EryC1 family. (387 aa)    
Predicted Functional Partners:
CEM61109.1
Polysaccharide biosynthesis protein.
  
 0.986
CEM62976.1
SAF domain protein.
 
  
 0.832
CEM61942.1
Cytidylyltransferase.
 
  
 0.817
rmlB
dTDP-glucose 4,6 dehydratase, NAD(P)-binding; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.786
CEM60609.1
DegT/DnrJ/EryC1/StrS aminotransferase family protein; Belongs to the DegT/DnrJ/EryC1 family.
  
     0.770
CEM63029.1
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein.
       0.638
CEM63031.1
FAD binding domain in molybdopterin dehydrogenase.
  
    0.617
ndhS
Nicotinate dehydrogenase small FeS subunit.
       0.614
CEM60410.1
UDP-N-acetylglucosamine 2-epimerase homolog.
  
  
 0.559
wbpI
UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase.
  
  
 0.559
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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