yecC protein (Treponema phagedenis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

yecC

Putative transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (245 aa)

Predicted Functional Partners:

CEM63049.1

0.999

CEM63048.1

0.996

CEM61929.1

0.991

CEM62903.1

0.911

CEM61413.1

0.906

CEM61226.1

0.901

CEM61225.1

0.900

CEM63433.1

0.900

CEM60619.1

0.899

CEM62888.1

0.899

Your Current Organism:

Treponema phagedenis

NCBI taxonomy Id: 162
Other names: T. phagedenis

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CEM60619.1	CEM61413.1	TPHV1_10287	TPHV1_190020	ABC transporter, permease protein.	ABC transporter, ATP-binding protein.	0.976
CEM60619.1	yecC	TPHV1_10287	TPHV1_60038	ABC transporter, permease protein.	Putative transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.899
CEM61225.1	CEM61226.1	TPHV1_160026	TPHV1_160027	Efflux ABC transporter, permease protein.	Efflux ABC transporter, permease protein.	0.851
CEM61225.1	yecC	TPHV1_160026	TPHV1_60038	Efflux ABC transporter, permease protein.	Putative transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.900
CEM61226.1	CEM61225.1	TPHV1_160027	TPHV1_160026	Efflux ABC transporter, permease protein.	Efflux ABC transporter, permease protein.	0.851
CEM61226.1	yecC	TPHV1_160027	TPHV1_60038	Efflux ABC transporter, permease protein.	Putative transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.901
CEM61413.1	CEM60619.1	TPHV1_190020	TPHV1_10287	ABC transporter, ATP-binding protein.	ABC transporter, permease protein.	0.976
CEM61413.1	yecC	TPHV1_190020	TPHV1_60038	ABC transporter, ATP-binding protein.	Putative transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.906
CEM61929.1	CEM63048.1	TPHV1_230006	TPHV1_60036	ABC transporter, permease protein.	ABC transporter, substrate-binding protein, family 3.	0.986
CEM61929.1	CEM63049.1	TPHV1_230006	TPHV1_60037	ABC transporter, permease protein.	ABC transporter, permease protein.	0.464
CEM61929.1	yecC	TPHV1_230006	TPHV1_60038	ABC transporter, permease protein.	Putative transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.991
CEM62888.1	yecC	TPHV1_50148	TPHV1_60038	ABC transporter, ATP-binding/permease protein.	Putative transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.899
CEM62903.1	yecC	TPHV1_500011	TPHV1_60038	Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.	Putative transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.911
CEM63048.1	CEM61929.1	TPHV1_60036	TPHV1_230006	ABC transporter, substrate-binding protein, family 3.	ABC transporter, permease protein.	0.986
CEM63048.1	CEM63049.1	TPHV1_60036	TPHV1_60037	ABC transporter, substrate-binding protein, family 3.	ABC transporter, permease protein.	0.999
CEM63048.1	yecC	TPHV1_60036	TPHV1_60038	ABC transporter, substrate-binding protein, family 3.	Putative transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.996
CEM63049.1	CEM61929.1	TPHV1_60037	TPHV1_230006	ABC transporter, permease protein.	ABC transporter, permease protein.	0.464
CEM63049.1	CEM63048.1	TPHV1_60037	TPHV1_60036	ABC transporter, permease protein.	ABC transporter, substrate-binding protein, family 3.	0.999
CEM63049.1	yecC	TPHV1_60037	TPHV1_60038	ABC transporter, permease protein.	Putative transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.999
CEM63433.1	yecC	TPHV1_90062	TPHV1_60038	Hypothetical protein; No homology to any previously reported sequences.	Putative transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.900

page 1 of 2

Server load: low (12%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About