STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM63054.1ABC transporter, permease protein. (296 aa)    
Predicted Functional Partners:
CEM63056.1
ABC transporter, solute-binding protein.
 
 0.994
CEM63055.1
ABC transporter, permease protein.
 
 
 0.975
CEM60649.1
ABC transporter, permease protein.
 
 0.902
CEM62309.1
ABC transporter, permease protein.
 
 0.898
CEM61106.1
ABC transporter, permease protein.
 
 0.895
amyD
Putative starch degradation products transport system permease protein AmyD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.884
ycjV
Putative sugar transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.875
CEM63233.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.802
CEM63237.1
ABC transporter, permease protein.
 
 
 0.794
CEM61348.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.649
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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