Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEM63123.1Ankyrin repeat protein. (963 aa)    
Predicted Functional Partners:
CEM60933.1
WD domain, G-beta repeat protein.
 
 
 0.958
CEM60452.1
Peptidyl-prolyl cis-trans isomerase.
  
 
 0.872
CEM62587.1
Putative ankyrin repeat-containing protein TP_0502; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.772
CEM61737.1
Oxidoreductase, short chain dehydrogenase/reductase family protein.
   
 0.701
CEM61945.1
CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.700
glpF
Putative glycerol uptake facilitator protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 0.698
CEM62022.1
Tetratricopeptide repeat protein.
 
 0.695
CEM62633.1
Tetratricopeptide repeat protein (modular protein).
 
 0.676
CEM61440.1
Leucine Rich Repeat protein.
   
 
 0.667
CEM60437.1
Phosphoribulokinase/uridine kinase family protein.
   
 0.659
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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