Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEM63130.1Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. (499 aa)    
Predicted Functional Partners:
CEM63129.1
Chain length determinant protein.
 
  
 0.994
CEM61109.1
Polysaccharide biosynthesis protein.
  
  
 0.774
CEM62533.1
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I.
 
  
 0.672
CEM62056.1
Phosphoribosyl transferase domain protein.
  
     0.668
CEM63003.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.597
CEM63128.1
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
       0.563
upp
Putative uracil phosphoribosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.561
cmk
Cytidylate kinase.
  
     0.553
SecE
Protein translocase subunit SecE (modular protein).
  
     0.536
CEM61816.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
   
 0.516
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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