STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM63139.1HAMP domain protein. (713 aa)    
Predicted Functional Partners:
cheR-2
CheR methyltransferase, SAM binding domain protein.
 
 0.991
cheA
Chemotaxis protein CheA.
 
 0.978
cheW
Chemotaxis protein CheW.
 
 0.976
cheB
Fused chemotaxis regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 0.941
cheR
CheR methyltransferase, SAM binding domain protein.
 0.940
cheY
Chemotaxis protein CheY.
 
  
 0.799
CEM61784.1
Diguanylate cyclase (GGDEF) domain protein (fragment).
  
 
 0.629
CEM63138.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.598
flgC
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.534
CEM61310.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein).
  
 
 0.504
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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