STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdsA-2Phosphatidate cytidylyltransferase. (208 aa)    
Predicted Functional Partners:
CEM61600.1
Tetratricopeptide repeat protein.
  
     0.763
CEM62339.1
Tetratricopeptide repeat protein.
  
     0.760
CEM61172.1
Tetratricopeptide repeat protein.
  
     0.748
CEM62632.1
Tetratricopeptide repeat protein.
  
     0.745
CEM61762.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.741
CEM62504.1
Tetratricopeptide repeat protein.
  
     0.741
CEM61165.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.737
CEM61592.1
OmpA family protein.
  
     0.734
CEM63036.1
Outer membrane lipoprotein carrier protein LolA.
  
     0.724
CEM60801.1
Fibronectin type III domain protein.
  
     0.717
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.