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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppFDipeptide transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the ABC transporter superfamily. (344 aa)    
Predicted Functional Partners:
CEM63155.1
ABC transporter, permease protein.
  
 0.997
CEM60619.1
ABC transporter, permease protein.
  
 0.990
CEM63156.1
ABC transporter, permease protein.
 
 0.979
CEM61411.1
ABC transporter, permease protein.
  
 0.934
oppB
Oligopeptide transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 0.933
CEM61410.1
ABC transporter, permease protein (fragment).
 
 
 0.903
yvrO
Uncharacterized ABC transporter ATP-binding protein YvrO.
 
     
0.898
oppD-2
Oligopeptide transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the ABC transporter superfamily.
 
    
0.807
CEM63157.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
   
 0.694
CEM62528.1
ABC transporter, substrate-binding protein, family 5.
  
 0.693
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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