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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM63167.1Myo-inositol catabolism protein IolB. (266 aa)    
Predicted Functional Partners:
iolC
5-dehydro-2-deoxygluconokinase.
 
 0.998
iolD
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
 
 0.997
yrbE
Uncharacterized oxidoreductase YrbE.
 
  
 0.964
iolE
Inosose dehydratase.
 
  
 0.953
IolG
Oxidoreductase, NAD-binding domain protein.
 
  
 0.933
ulaE
L-xylulose 5-phosphate 3-epimerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.804
iolA
Methylmalonate semialdehyde dehydrogenase (acylating) 2.
 
  
 0.793
CEM60427.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.772
CEM62364.1
Oxidoreductase, NAD-binding domain protein.
  
  
 0.772
FbpA
Fibronectin-binding protein A domain protein.
   
    0.762
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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