STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM63184.1ABC-2 type transporter. (392 aa)    
Predicted Functional Partners:
CEM63186.1
ABC transporter, ATP-binding protein.
 
  
 0.967
CEM63185.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.946
yfiL
Uncharacterized ABC transporter ATP-binding protein YfiL.
 
  
 0.797
CEM62293.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein.
 
  
 0.764
CEM62295.1
Response regulator receiver domain protein.
 
   
 0.749
CEM62422.1
Putative YcaO-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.642
yfiK
Uncharacterized transcriptional regulatory protein YfiK.
 
   
 0.552
CEM60694.1
Nitroreductase family protein.
  
  
 0.543
CEM60364.1
Nitroreductase family protein.
  
  
 0.543
CEM62409.1
Nitroreductase family protein.
  
  
 0.543
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.