Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CEM63184.1ABC-2 type transporter. (392 aa)    
Predicted Functional Partners:
CEM63186.1
ABC transporter, ATP-binding protein.
 
  
 0.971
CEM63185.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.946
yfiL
Uncharacterized ABC transporter ATP-binding protein YfiL.
 
  
 0.823
CEM62293.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein.
 
  
 0.766
CEM62295.1
Response regulator receiver domain protein.
 
   
 0.747
CEM62422.1
Putative YcaO-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.674
CEM60694.1
Nitroreductase family protein.
  
  
 0.614
CEM60364.1
Nitroreductase family protein.
  
  
 0.614
CEM62409.1
Nitroreductase family protein.
  
  
 0.614
CEM62806.1
Putative NADPH-flavin oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the flavin oxidoreductase frp family.
  
  
 0.614
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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