STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM63211.1Cyclic nucleotide-binding domain protein. (332 aa)    
Predicted Functional Partners:
CEM63210.1
Cyclic nucleotide-binding domain protein.
    
0.934
CEM63213.1
ATP-grasp domain protein.
 
   0.836
CEM62513.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
   0.825
CEM61592.1
OmpA family protein.
 
  
 0.820
CEM60657.1
LysM domain protein.
 
 
 
 0.800
CEM61976.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.774
CEM61588.1
Adenylate/guanylate cyclase catalytic domain protein.
 
 
 0.770
CEM61762.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 
 0.768
CEM60801.1
Fibronectin type III domain protein.
  
     0.767
CEM61784.1
Diguanylate cyclase (GGDEF) domain protein (fragment).
  
 
 0.767
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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