Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CEM63213.1ATP-grasp domain protein. (543 aa)    
Predicted Functional Partners:
oadA
Oxaloacetate decarboxylase alpha chain.
  
 
 0.984
CEM63305.1
Dehydrogenase, FMN-dependent.
 
    
 0.900
CEM63211.1
Cyclic nucleotide-binding domain protein.
 
   0.831
CEM63214.1
N-acetylmuramoyl-L-alanine amidase.
       0.794
CEM63215.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
       0.792
CEM61059.1
Biotin--(acetyl-CoA-carboxylase) ligase.
  
 0.765
ribD
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
   0.745
CEM61976.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.734
CEM63212.1
PHP domain protein.
       0.718
CEM62513.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.665
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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