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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM63214.1N-acetylmuramoyl-L-alanine amidase. (380 aa)    
Predicted Functional Partners:
CEM63215.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
       0.813
CEM63213.1
ATP-grasp domain protein.
       0.805
CEM63212.1
PHP domain protein.
       0.729
flaA
Flagellar filament outer layer protein.
       0.618
CEM63036.1
Outer membrane lipoprotein carrier protein LolA.
  
 
   0.580
rlpA
Sporulation and cell division repeat protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
 
 
 0.573
yaeT
Outer membrane protein assembly complex, YaeT protein.
 
   
 0.537
CEM60912.1
Peptidase, S54 family.
  
   0.527
CEM61960.1
Peptidase, S54 family.
  
   0.527
CEM63075.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
    
   0.510
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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