STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lnt-2Apolipoprotein N-acyltransferase 1; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. (548 aa)    
Predicted Functional Partners:
CEM63223.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.814
CEM63224.1
Competence/damage-inducible domain protein CinA; Belongs to the CinA family.
       0.791
yaeT
Outer membrane protein assembly complex, YaeT protein.
 
   
 0.786
CEM62852.1
Permease, YjgP/YjgQ family.
 
    0.711
rpsA
Ribosomal protein S1.
 
     0.685
CEM62853.1
Permease, YjgP/YjgQ family.
 
    0.635
rho
Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.
 
    0.606
CEM62250.1
Glycosyl hydrolase, family 57.
  
     0.551
CEM61173.1
Putative zinc ribbon domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.550
CEM61611.1
Efflux ABC transporter, permease protein.
 
   
 0.543
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.