STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM63237.1ABC transporter, permease protein. (300 aa)    
Predicted Functional Partners:
CEM63233.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 
0.983
CEM63236.1
ABC transporter, permease protein.
 
 
 0.975
CEM63232.1
ABC transporter, permease protein.
 
 
 0.974
CEM63238.1
ABC transporter, solute-binding protein.
 
 
 0.973
CEM63235.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
    0.947
ycjV
Putative sugar transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.908
CEM61107.1
ABC transporter, permease protein.
 
 
 0.889
CEM60650.1
ABC transporter, permease protein.
 
 
 0.883
CEM62310.1
ABC transporter, permease protein.
 
 
 0.857
CEM62957.1
Protein LplC (fragment).
 
 
 0.855
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.