Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CEM63255.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (304 aa)    
Predicted Functional Partners:
CEM61952.1
Hydrolase, alpha/beta domain protein.
  
     0.683
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
   0.655
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.639
CEM63087.1
Pyridine nucleotide-disulfide oxidoreductase (fragment).
  
 
 0.559
CEM63026.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.545
rbpD
Putative RNA-binding protein RbpD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    
   0.544
CEM62926.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.541
CEM63404.1
Methylase involved in ubiquinone/menaquinone biosynthesis.
     0.450
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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