Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEM61784.1 | CEM63299.1 | TPHV1_210017 | TPHV1_80052 | Diguanylate cyclase (GGDEF) domain protein (fragment). | Peptidase, M23 family. | 0.438 |
CEM61784.1 | fliN | TPHV1_210017 | TPHV1_80085 | Diguanylate cyclase (GGDEF) domain protein (fragment). | Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. | 0.935 |
CEM61784.1 | murA | TPHV1_210017 | TPHV1_20050 | Diguanylate cyclase (GGDEF) domain protein (fragment). | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.450 |
CEM62048.1 | CEM63214.1 | TPHV1_270005 | TPHV1_70077 | LysM domain protein. | N-acetylmuramoyl-L-alanine amidase. | 0.482 |
CEM62048.1 | CEM63299.1 | TPHV1_270005 | TPHV1_80052 | LysM domain protein. | Peptidase, M23 family. | 0.734 |
CEM62589.1 | CEM63214.1 | TPHV1_40092 | TPHV1_70077 | Penicillin-binding protein, 1A family. | N-acetylmuramoyl-L-alanine amidase. | 0.429 |
CEM62589.1 | CEM63299.1 | TPHV1_40092 | TPHV1_80052 | Penicillin-binding protein, 1A family. | Peptidase, M23 family. | 0.716 |
CEM62589.1 | mltG | TPHV1_40092 | TPHV1_150058 | Penicillin-binding protein, 1A family. | YceG family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.552 |
CEM62589.1 | murA | TPHV1_40092 | TPHV1_20050 | Penicillin-binding protein, 1A family. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.658 |
CEM63214.1 | CEM62048.1 | TPHV1_70077 | TPHV1_270005 | N-acetylmuramoyl-L-alanine amidase. | LysM domain protein. | 0.482 |
CEM63214.1 | CEM62589.1 | TPHV1_70077 | TPHV1_40092 | N-acetylmuramoyl-L-alanine amidase. | Penicillin-binding protein, 1A family. | 0.429 |
CEM63214.1 | CEM63299.1 | TPHV1_70077 | TPHV1_80052 | N-acetylmuramoyl-L-alanine amidase. | Peptidase, M23 family. | 0.464 |
CEM63295.1 | CEM63297.1 | TPHV1_80048 | TPHV1_80050 | PSP1 C-terminal domain protein. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.422 |
CEM63295.1 | CEM63298.1 | TPHV1_80048 | TPHV1_80051 | PSP1 C-terminal domain protein. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.573 |
CEM63295.1 | CEM63299.1 | TPHV1_80048 | TPHV1_80052 | PSP1 C-terminal domain protein. | Peptidase, M23 family. | 0.514 |
CEM63297.1 | CEM63295.1 | TPHV1_80050 | TPHV1_80048 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | PSP1 C-terminal domain protein. | 0.422 |
CEM63297.1 | CEM63298.1 | TPHV1_80050 | TPHV1_80051 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.773 |
CEM63297.1 | CEM63299.1 | TPHV1_80050 | TPHV1_80052 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Peptidase, M23 family. | 0.773 |
CEM63298.1 | CEM63295.1 | TPHV1_80051 | TPHV1_80048 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | PSP1 C-terminal domain protein. | 0.573 |
CEM63298.1 | CEM63297.1 | TPHV1_80051 | TPHV1_80050 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.773 |
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