Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CEM63299.1Peptidase, M23 family. (342 aa)    
Predicted Functional Partners:
CEM63298.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
   
 0.861
CEM63297.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.773
CEM62048.1
LysM domain protein.
 
   
 0.731
CEM62589.1
Penicillin-binding protein, 1A family.
  
   
 0.712
fliN
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
   
   0.591
CEM63295.1
PSP1 C-terminal domain protein.
       0.513
CEM63214.1
N-acetylmuramoyl-L-alanine amidase.
 
   
 0.463
rseP
Putative zinc metalloprotease TP_0600; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.437
mltG
YceG family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
  
   
 0.435
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
 
   
 0.427
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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