STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM63305.1Dehydrogenase, FMN-dependent. (305 aa)    
Predicted Functional Partners:
CEM63213.1
ATP-grasp domain protein.
 
      0.900
CEM60417.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
      0.896
CEM60846.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 0.781
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.707
CEM63306.1
Putative shikimate dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
     
 0.699
ydbK
Putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.607
CEM61005.1
Pyridine nucleotide-disulfide oxidoreductase (fragment).
  
  
 0.597
CEM60428.1
2-aminoethylphosphonate--pyruvate transaminase.
  
 0.586
rpiA
Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
     
 0.557
pdxB
4-phosphoerythronate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
  
 0.528
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.