STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
citECitrate lyase, citryl-ACP lyase (beta) subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (296 aa)    
Predicted Functional Partners:
citD
Citrate lyase, acyl carrier (gamma) subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.995
citF
Citrate lyase, citrate-ACP transferase (alpha) subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.995
citX
Holo-ACP synthase CitX.
 
  
 0.990
citC
(citrate (Pro-3S)-lyase) ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
 
  
 0.973
citG
Putative 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.944
araD
L-ribulose-5-phosphate 4-epimerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
    0.802
CEM63355.1
Putative L-ribulose-5-phosphate 4-epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
    0.802
fruA
PTS system fructose-specific EIIABC component.
   
  
 0.647
fruA-2
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PTS system fructose-specific EIIABC component (Includes: Fructose-specific phosphotransferase enzyme IIA component; Fructose-specific phosphotransferase enzyme IIB component; Fructose permease IIC component).
   
  
 0.647
oadA
Oxaloacetate decarboxylase alpha chain.
  
  
 0.637
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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