STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM63433.1Hypothetical protein; No homology to any previously reported sequences. (249 aa)    
Predicted Functional Partners:
pstB
Phosphate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
     
0.900
aapP
Amino-acid transporter subunit; Function of strongly homologous gene; transporter.
 
     
0.900
yecC
Putative transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     
0.900
potA-2
Polyamine transporter subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
     
0.895
CEM60999.1
Hypothetical protein; No homology to any previously reported sequences.
 
     0.886
ycjV
Putative sugar transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     
0.853
CEM63430.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
   0.780
CEM63431.1
Histidine kinase.
       0.773
CEM63432.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.773
CEM61455.1
ABC transporter, ATP-binding protein.
 
      0.719
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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