Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEM60999.1 | CEM63433.1 | TPHV1_130037 | TPHV1_90062 | Hypothetical protein; No homology to any previously reported sequences. | Hypothetical protein; No homology to any previously reported sequences. | 0.886 |
CEM61455.1 | CEM63433.1 | TPHV1_190062 | TPHV1_90062 | ABC transporter, ATP-binding protein. | Hypothetical protein; No homology to any previously reported sequences. | 0.719 |
CEM63430.1 | CEM63431.1 | TPHV1_90059 | TPHV1_90060 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Histidine kinase. | 0.906 |
CEM63430.1 | CEM63432.1 | TPHV1_90059 | TPHV1_90061 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.777 |
CEM63430.1 | CEM63433.1 | TPHV1_90059 | TPHV1_90062 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Hypothetical protein; No homology to any previously reported sequences. | 0.780 |
CEM63431.1 | CEM63430.1 | TPHV1_90060 | TPHV1_90059 | Histidine kinase. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.906 |
CEM63431.1 | CEM63432.1 | TPHV1_90060 | TPHV1_90061 | Histidine kinase. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.779 |
CEM63431.1 | CEM63433.1 | TPHV1_90060 | TPHV1_90062 | Histidine kinase. | Hypothetical protein; No homology to any previously reported sequences. | 0.773 |
CEM63432.1 | CEM63430.1 | TPHV1_90061 | TPHV1_90059 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.777 |
CEM63432.1 | CEM63431.1 | TPHV1_90061 | TPHV1_90060 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Histidine kinase. | 0.779 |
CEM63432.1 | CEM63433.1 | TPHV1_90061 | TPHV1_90062 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Hypothetical protein; No homology to any previously reported sequences. | 0.773 |
CEM63433.1 | CEM60999.1 | TPHV1_90062 | TPHV1_130037 | Hypothetical protein; No homology to any previously reported sequences. | Hypothetical protein; No homology to any previously reported sequences. | 0.886 |
CEM63433.1 | CEM61455.1 | TPHV1_90062 | TPHV1_190062 | Hypothetical protein; No homology to any previously reported sequences. | ABC transporter, ATP-binding protein. | 0.719 |
CEM63433.1 | CEM63430.1 | TPHV1_90062 | TPHV1_90059 | Hypothetical protein; No homology to any previously reported sequences. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.780 |
CEM63433.1 | CEM63431.1 | TPHV1_90062 | TPHV1_90060 | Hypothetical protein; No homology to any previously reported sequences. | Histidine kinase. | 0.773 |
CEM63433.1 | CEM63432.1 | TPHV1_90062 | TPHV1_90061 | Hypothetical protein; No homology to any previously reported sequences. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.773 |
CEM63433.1 | aapP | TPHV1_90062 | TPHV1_230007 | Hypothetical protein; No homology to any previously reported sequences. | Amino-acid transporter subunit; Function of strongly homologous gene; transporter. | 0.900 |
CEM63433.1 | potA-2 | TPHV1_90062 | TPHV1_30051 | Hypothetical protein; No homology to any previously reported sequences. | Polyamine transporter subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | 0.895 |
CEM63433.1 | pstB | TPHV1_90062 | TPHV1_120006 | Hypothetical protein; No homology to any previously reported sequences. | Phosphate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter. | 0.900 |
CEM63433.1 | ycjV | TPHV1_90062 | TPHV1_50080 | Hypothetical protein; No homology to any previously reported sequences. | Putative sugar transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. | 0.853 |
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