Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEM63437.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (344 aa)    
Predicted Functional Partners:
CEM63438.1
AAA-like domain protein.
  
  
 0.802
CEM63457.1
Tetratricopeptide repeat protein.
    
 
 0.598
CEM63440.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
       0.431
CEM63439.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.418
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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