STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxuAMannonate dehydratase; Catalyzes the dehydration of D-mannonate. (355 aa)    
Predicted Functional Partners:
CEM63462.1
Mannitol dehydrogenase domain protein.
 
 0.998
uxaC
Uronate isomerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.991
CEM61097.1
Kinase, PfkB family.
    
 0.828
rpe
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
     
  0.800
rpiA
Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
     
  0.800
uidA
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.795
CEM63465.1
TRAP transporter solute receptor, DctP family.
     
 0.746
CEM63464.1
TRAP transporter, DctQ-like membrane protein.
       0.734
CEM63463.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.730
CEM63468.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
     
 0.597
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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