STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM63471.1Transcriptional regulator, DeoR family. (255 aa)    
Predicted Functional Partners:
fruK
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.785
fruA
PTS system fructose-specific EIIABC component.
  
  
 0.784
fruA-2
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PTS system fructose-specific EIIABC component (Includes: Fructose-specific phosphotransferase enzyme IIA component; Fructose-specific phosphotransferase enzyme IIB component; Fructose permease IIC component).
  
  
 0.784
CEM61737.1
Oxidoreductase, short chain dehydrogenase/reductase family protein.
  
  
 0.661
CEM63472.1
Hypothetical protein; No homology to any previously reported sequences.
       0.569
uidA
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
  
  
 0.466
CEM63167.1
Myo-inositol catabolism protein IolB.
  
  
 0.429
CEM63470.1
Hydrolase, haloacid dehalogenase-like family protein.
       0.407
CEM61784.1
Diguanylate cyclase (GGDEF) domain protein (fragment).
  
  
 0.402
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.