STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN78061.1Hypothetical protein. (254 aa)    
Predicted Functional Partners:
KRN78062.1
Hypothetical protein.
 
  
 0.941
KRN78063.1
ABC transporter ATP-binding protein.
 
    0.922
KRN76814.1
ABC transporter, ATP-binding protein.
 
  
 0.829
KRN77106.1
ATP-binding protein.
 
  
 0.813
KRN77105.1
Hypothetical protein.
 
  
 0.803
KRN76815.1
Hypothetical protein.
 
  
 0.801
dld
D-lactate dehydrogenase; Catalyzes the oxidation of D-lactate to pyruvate. Belongs to the quinone-dependent D-lactate dehydrogenase family.
       0.495
KRN78064.1
Hypothetical protein.
       0.428
KRN78065.1
ABC superfamily ATP binding cassette transporter, ABC protein.
       0.428
KRN78066.1
Hypothetical protein.
       0.423
Your Current Organism:
Weissella minor
NCBI taxonomy Id: 1620
Other names: ATCC 35412, BCRC 14049, CCRC 14049, CCRC:14049, CCUG 30668, CECT 572, CIP 102978, DSM 20014, LMG 9847, LMG:9847, Lactobacillus minor, Lactobacillus viridescens subsp. minor, NCIMB 701973, W. minor, strain 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.