STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN77000.1Hypothetical protein. (123 aa)    
Predicted Functional Partners:
KRN77001.1
Nucleotidyltransferase DNA polymerase for DNA repair; Belongs to the DNA polymerase type-Y family.
 
    0.958
KRN77742.1
Regulatory protein MarR.
  
     0.468
KRN76822.1
ABC transporter, permease protein.
  
     0.432
KRN77002.1
Hypothetical protein.
       0.431
KRN76695.1
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
     0.415
KRN76982.1
Hypothetical protein.
  
     0.412
KRN76998.1
Acetoacetate decarboxylase.
       0.403
KRN76999.1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
       0.403
KRN76756.1
Hypothetical protein.
  
     0.402
Your Current Organism:
Weissella minor
NCBI taxonomy Id: 1620
Other names: ATCC 35412, BCRC 14049, CCRC 14049, CCRC:14049, CCUG 30668, CECT 572, CIP 102978, DSM 20014, LMG 9847, LMG:9847, Lactobacillus minor, Lactobacillus viridescens subsp. minor, NCIMB 701973, W. minor, strain 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.